Title |
Immunogenomics: recent discoveries |
| Genetics Vol:1 Iss:2 (2009-12-21) : 1-5 |
Authors |
Mayank Gupta, Nikhil Gupta, Soham Trivedi, Prasad Patil, Girish Gupta, Vamsi Krishna K, Hipal Gaudani, Gomase V.S. |
Published on |
21 Dec 2009 Pages : 1-5 Article Id : BIA0000193 Views : 1151 Downloads : 1575 |
DOI | http://dx.doi.org/10.9735/0975-2862.1.2.1-5 |
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Immunogenomics is a new research field, which addresses the interface between host and
(pathogen) proteome, bridging informatics technology, genomics, proteomics, immunology and clinical
medicine. The switch from the paradigm of solely hypothesis-driven immunological research to a more
interactive and flexible relationship between classical research and a new discovery-driven approach is
termed immunogenomics. This review will focus on the immunogenomics and recent discoveries in
Immunogenomics, which are leading to insights into novel immunomodulatory therapies. The research
regarding the different aspects of immunogenomics; rather than providing a comprehensive review, we will
highlight various factors that influence immunogenomics and how modulation of the immune response may
be incorporated into future trends.
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Title |
Analysis of the genetic diversity of arthritis patients with reference to the factors inducing its onset |
| Genetics Vol:1 Iss:2 (2009-12-21) : 6-9 |
Authors |
Mujapara A.K, Bushra Jarullah |
Published on |
21 Dec 2009 Pages : 6-9 Article Id : BIA0000194 Views : 1133 Downloads : 1400 |
DOI | http://dx.doi.org/10.9735/0975-2862.1.2.6-9 |
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A lot of research on the prevalence of arthritis in India population has been carried out. However
no studies on the genetic relationships within groups of arthritic patients in India have been reported. The
current study focuses on analyzing the genetic diversity between patients suffering from the various types of
arthritis with reference to factors inducing its onset. A total of 36 patients suffering from different types of
arthritis were analyzed with reference to the age, gender, BMI, family history, hemoglobin and thyroid profile.
The variation in the genetic profile was also analyzed using the RAPD technique. Data analysis showed
patients suffering from arthritis to be at a greater risk of thyroid disorders, however the type of arthritis
played a significant role. A distinct correlation between the genetic variation and presence of arthritis
including its type was observed.
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Title |
Proteins bioassay: recent scenario for new target validations |
| Genetics Vol:1 Iss:2 (2009-12-21) : 10-16 |
Authors |
Pawar S.V., Chate P.B., Kayarkar N.A., Durgude S.G., Maurya B.D., Gomase V.S. |
Published on |
21 Dec 2009 Pages : 10-16 Article Id : BIA0000195 Views : 1107 Downloads : 1609 |
DOI | http://dx.doi.org/10.9735/0975-2862.1.2.10-16 |
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This article reviews different aspects of protein engineering technologies such as protein
screening, NMR, EM & x-ray crystallography, In silico protein structure, protein cell free technologies, protein
chips and arrays, custom peptide synthesis as well as nanoscale / microscale separation or purification
methods briefly and where they are being used to solve protein queries.
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Title |
Proteomics: Emerging analytical techniques |
| Genetics Vol:1 Iss:2 (2009-12-21) : 17-24 |
Authors |
Gomase V.S., Maurya Bharati D., Pawar Shweta V., Chate Priya B., Kayarkar Namita A., Durgude Suvarna G., Boraste Amol, Kadam Pallavi |
Published on |
21 Dec 2009 Pages : 17-24 Article Id : BIA0000196 Views : 1109 Downloads : 1289 |
DOI | http://dx.doi.org/10.9735/0975-2862.1.2.17-24 |
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Genomic and proteomic approaches together promise to reveal a multidimensional view of a
biological system. As compared to Genomic approaches, Proteomic studies have their fair amount of
limitations. The technical issues troubling proteomic approaches include gel-to-gel reproducibility, biases
toward identifying similar proteins in unrelated proteomic studies, and reliability of protein extraction
methods. Many types of information cannot be obtained from the study of genes alone because proteins not
genes are responsible for the phenotypes of cells. Mechanisms of disease, aging and the effects of the
environment cannot be explained solely by the genome because through the study of proteins can protein
modifications be analyzed and the targets of drugs of identified.
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Title |
Oncogenomics: Clinical pathogenesis approach |
| Genetics Vol:1 Iss:2 (2009-12-21) : 25-43 |
Authors |
Gupta G., Gupta N., Trivedi S., Patil P., Gupta M., Jhadav A., Vamsi K.K., Khairnar Y., Boraste A., Mujapara A.K., Joshi B. |
Published on |
21 Dec 2009 Pages : 25-43 Article Id : BIA0000197 Views : 1126 Downloads : 1263 |
DOI | http://dx.doi.org/10.9735/0975-2862.1.2.25-43 |
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Oncogenomics is new research sub-field of genomics, which applies high throughput
technologies to characterize genes associated with cancer and synonymous with cancer genomics. The
goal of oncogenomics is to identify new oncogenes or tumor suppressor genes that may provide new
insights into cancer diagnosis, predicting clinical outcome of cancers, and new targets for cancer therapies.
Oncoproteomics is the term used to describe the application of proteomic technologies in oncology and
parallels the related field of oncogenomics. It is now contributing to the development of personalized
management of cancer. Genomics has generated a wealth of data that is now being used to identify
additional molecular alterations associated with cancer development. Mapping these alterations in the
cancer genome is a critical first step in dissecting oncological pathways.
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Title |
MALDI-TOF based Metabolomic approach |
| Genetics Vol:1 Iss:2 (2009-12-21) : 44-46 |
Authors |
Kapoor R.A., Ladak S.S., Gomase V.S. |
Published on |
21 Dec 2009 Pages : 44-46 Article Id : BIA0000198 Views : 1651 Downloads : 1528 |
DOI | http://dx.doi.org/10.9735/0975-2862.1.2.44-46 |
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Metabolomics is the study of metabolite profiles in biological and pathological samples (urine, plasma, saliva, blood fat biopsies, plant cells, bacteria viruses and fungi. The metabolome is the most predictive phenotype: consequently, the comprehensive and quantitative research study of metabolites is a desirable tool for diagnosing disease, Identifying new therapeutic targets and enabling appropriate treatments. In addition to other Mass Spectrometry (MS) methodologies used for determining the localization of small molecules in tissue, MALDI-TOF/TOF can also be used to detect drugs and their metabolites in tissue without the burden of matrix interference.
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Title |
Toxicogenomics and cancer pathogenesis |
| Genetics Vol:1 Iss:2 (2009-12-21) : 47-60 |
Authors |
Gupta N., Gupta G., Trivedi S., Patil P., Gupta M., Jhadav A., Vamsi K.K., Khairnar Y., Boraste A., Mujapara A.K., Joshi B. |
Published on |
21 Dec 2009 Pages : 47-60 Article Id : BIA0000199 Views : 1150 Downloads : 1400 |
DOI | http://dx.doi.org/10.9735/0975-2862.1.2.47-60 |
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Toxicogenomics is emerging field give idea of the application of large-scale differential gene
expression data to toxicology, starting to influence drug discovery and development in the pharmaceutical
industry. Its future potential in cancer pathogenesis, study of poisons and poisoning and has an ancient and
venerable history. Toxicogenomics is the merging of toxicology with technologies that have been developed,
together with bioinformatics, to identify and quantify global gene expression changes for gene therapy.
Immunotoxic processes and the development of in vitro screening assays is therefore expected to be of
value for mechanistic insight into immunotoxicity and hazard identification of existing and novel compounds.
Successful application of toxicogenomic approaches, such as DNA microarrays, inextricably relies on
appropriate data management, the ability to extract knowledge from massive amounts of data and the
availability of functional information for data interpretation. Toxicogenomics is considered a valuable tool for
reducing pharmaceutical candidate attrition by facilitating earlier identification, prediction and understanding
of toxicities. Pharmaco-epidemiological (toxicogenomics) data is now available for both antiepileptic drugs,
evidence for human carcinogenicity. Therapeutic researches converge triad of rejuvenation, regeneration or
replacement strategies that rely on self-healing processes, stem cell regeneration organ transplantation.
Metastases studies usually display more genetic changes than the primary tumour. Helix-loop-helix
application in translational and functional toxicogenomics transcription factors has been implicated in
diverse cellular processes such as proliferation, apoptosis, differentiation, and migration.
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