DETECTION OF GEMINI VIRUS IN CASSAVA AND DIFFERENTIATION BETWEEN SLCMV AND ICMV BY MULTIPLEX PCR

JITENDRA KUMAR1*, R. RABINDRAN2
1Department of Plant Pathology, Centerfor Plant Protection Studies, Tamil Nadu Agricultural University, Coimbatore, 641003, Tamil Nadu, India
2Department of Plant Pathology, Centerfor Plant Protection Studies, Tamil Nadu Agricultural University, Coimbatore, 641003, Tamil Nadu, India
* Corresponding Author : jitpatho@gmail.com

Received : 25-02-2018     Accepted : 02-03-2018     Published : 15-03-2018
Volume : 10     Issue : 5       Pages : 5255 - 5259
Int J Agr Sci 10.5 (2018):5255-5259

Keywords : Cassava, Gemini viruses, ICMV, Multiplex PCR, SLCMV
Conflict of Interest : None declared
Acknowledgements/Funding : The author is grateful to I.C.A.R., Ministry of Agriculture, Government of India for providing Junior Research Fellowship (JRF) that helped me lot during my research. We are also grateful to the Professor and head, Department of Plant Pathology, Centre for Plant Protection Studies, Tamil Nadu Agricultural University, Coimbatore, 641003, Tamil Nadu for providing the laboratory facilities
Author Contribution : All author equally contributed

Cite - MLA : KUMAR, JITENDRA and RABINDRAN, R. "DETECTION OF GEMINI VIRUS IN CASSAVA AND DIFFERENTIATION BETWEEN SLCMV AND ICMV BY MULTIPLEX PCR." International Journal of Agriculture Sciences 10.5 (2018):5255-5259.

Cite - APA : KUMAR, JITENDRA, RABINDRAN, R. (2018). DETECTION OF GEMINI VIRUS IN CASSAVA AND DIFFERENTIATION BETWEEN SLCMV AND ICMV BY MULTIPLEX PCR. International Journal of Agriculture Sciences, 10 (5), 5255-5259.

Cite - Chicago : KUMAR, JITENDRA and R., RABINDRAN. "DETECTION OF GEMINI VIRUS IN CASSAVA AND DIFFERENTIATION BETWEEN SLCMV AND ICMV BY MULTIPLEX PCR." International Journal of Agriculture Sciences 10, no. 5 (2018):5255-5259.

Copyright : © 2018, JITENDRA KUMAR and R. RABINDRAN, Published by Bioinfo Publications. This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution and reproduction in any medium, provided the original author and source are credited.

Abstract

Cassava mosaic disease (CMD) caused by cassava mosaic Gemini viruses (CMGs) (Geminiviridae: Begomovirus) is undoubtedly the most important constraint to the production of cassava in South India. Studies were conducted for identification of cassava mosaic virus at Department of Plant Pathology, TNAU, Coimbatore during 2008-09 and 2009-10. Diseased samples were collected from different places of Tamil Nadu and analyzed for the presence of geminiviruses by PCR using Deng’s degenerate primers. Sri Lankan cassava mosaic virus (SLCMV) detected by using TAS-ELISA and multiplex PCR using to differentiate SLCMV and ICMV if dual infection is present. Monoclonal antibody AS-0424/1 (DSMZ) was used in TAS-ELISA. Among all the samples tested, highest OD value (0.941) was recorded in samples collected from Pollachi of Coimbatore district and lowest OD value (0.247) was recorded from the samples collected from Ambilikkai of Dindigul district. PCR products by using Deng’s degenerate primers were amplified at 560 bp from all cassava samples, revealed the association of Geminiviruses with this disease. The multiplex PCR analysis revealed the presence of only SLCMV (599 bp band size). In all the samples tested neither ICMV nor dual occurrence of both ICMV and SLCMV were observed.

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