Nair V.K.1, More M.K.2, Sawant J.J.3, Thikekar V.P4, Philip P.A.5, Ojha M.D.6, Gomase V.S.7
1Bhavan's College, Andheri (W), Mumbai- 400058, India
2Tilak College of Science and Commerce, Vashi, Navi Mumbai
3Gogate Jogalekar College of Science, Arts and Commerce, Ratnagiri, India
4Bhartiya Gramin Punarrachana Sanstha's Arts, Commerce and Science, Wadala,Mumbai, India
5C.M.S. College of Science and Commerce, Tamil Nadu, India
6I.C.L.E's Motilal Jhunjhunwala College of Arts, Science and Commerce, Vashi, Navi Mumbai
7School of Technology, S.R.T.M. University, Sub-Centre, Latur, 413512, India
Received : - Accepted : - Published : 21-12-2009
Volume : 1 Issue : 2 Pages : 1 - 7
Int J Chem Res 1.2 (2009):1-7
DOI : http://dx.doi.org/10.9735/0975-3699.1.2.1-7
Keywords : Biocatalyst, Biomaterial, Protein Design, Extremophilic Enzyme, Protein Biomaterial Design
Conflict of Interest : None declared
This article reviews the available literature on the function of proteins as biocatalysts and biomaterials. It also explains methods like protein designing, enzyme evolution, metabolic pathway engineering and systems biology. Further, it deals with the discovery and development of extremophilic enzymes and industrial enzymes along with the case studies on novel economical industrial enzymes.
[1] Lim E.K., Ashford D.A., Hou B., Jackson
R.G.,Bowles D.J. (2004) Biotechnology
and bioengineering, 87 (5), 623-631
» CrossRef » Google Scholar » PubMed » DOAJ » CAS » Scopus
[2] Llerena-Suster C.R., Foresti M.L., Briand
L.E., Morcelle S.R. (2009) Colloids Surf
B Biointerfaces, 72(1):16-24
» CrossRef » Google Scholar » PubMed » DOAJ » CAS » Scopus
[3] Prats H., Laurell H., Bossard C., Garmy S.,
Barbara., Arnal.(2004) European patent
application, EP20030290305
» CrossRef » Google Scholar » PubMed » DOAJ » CAS » Scopus
[4] Vendrely C., Ackerschott C., Römer L.,
Scheibel T. (2008) Methods in molecular
biology, 474, p.3-14.
» CrossRef » Google Scholar » PubMed » DOAJ » CAS » Scopus
[5] Saghatelian A., Yokobayashi Y., Soltani K.,
Reza M. (2001) Nature 409 (6822):
797–801
» CrossRef » Google Scholar » PubMed » DOAJ » CAS » Scopus
[6] Daniele S., Pierpaolo B., Alessandro P.,
Marco P., Alfonso J. (2008) AIP
Conference Proceedings
» CrossRef » Google Scholar » PubMed » DOAJ » CAS » Scopus
[7] Dahiyat B. I., Sarisky C. A., Mayo S. L.
(1997) J. Mol. Biol. 273, 789±796.
» CrossRef » Google Scholar » PubMed » DOAJ » CAS » Scopus
[8] Street A.G. and Mayo S.L.(1999) Structure,
7(5), R105–R109
» CrossRef » Google Scholar » PubMed » DOAJ » CAS » Scopus
[9] Edward B.F. and Harbury P.B. (2007)
Current Opinion in Structural Biology,
17:199-204
» CrossRef » Google Scholar » PubMed » DOAJ » CAS » Scopus
[10] Williams G.J., Nelson A.S., Berry A. (2004)
Cell Mol Life Sci.;61(24):3034-46
» CrossRef » Google Scholar » PubMed » DOAJ » CAS » Scopus
[11] Alves R., Chaleil R.A., Sternberg M.J.
(2002) J Mol Biol, 22;324(2):387
» CrossRef » Google Scholar » PubMed » DOAJ » CAS » Scopus
[12] Kondrashov F.A., Koonin E.V., Morgunov
I.G., Finogenova T.V., Kondrashova
M.N. (2006) Biol Direct. 23;1:31
» CrossRef » Google Scholar » PubMed » DOAJ » CAS » Scopus
[13] Isidore R., Gregory S. Systems Biology,
Volume I: Genomics, Oxford University
Press, USA, 2006, ISBN-13: 978-
0195300819
» CrossRef » Google Scholar » PubMed » DOAJ » CAS » Scopus
[14] Ostergaard S., Olsson L., and Nielsen J.
(2000) Microbiol Mol Biol, 64(1): 34–50
» CrossRef » Google Scholar » PubMed » DOAJ » CAS » Scopus
[15] Pandhal J., Noirel J., Wright P.C., Biggs
C.A. (2009) Saline Systems, 7;5:8.
» CrossRef » Google Scholar » PubMed » DOAJ » CAS » Scopus
[16] Chou C.H., Chang W.C., Chiu C.M., Huang
C.C., Huang H.D. (2009) Nucleic Acids
Res. 1;37(Web Server issue):W129-34.
» CrossRef » Google Scholar » PubMed » DOAJ » CAS » Scopus
[17] Chou Chung-Jung, Shockley Keith R.,
Conners Shannon B., Lewis Derrick L.,
Comfort Donald A., Adams Michael W.
W., Kelly Robert M. (2007) Applied and
environmental microbiology,
73(21):6842-53
» CrossRef » Google Scholar » PubMed » DOAJ » CAS » Scopus
[18] Ferrer M., Golyshina O., Beloqui A.,
Golyshin P.N. (2007) Current Opinion in
Microbiology,10 (3), 207-214.
» CrossRef » Google Scholar » PubMed » DOAJ » CAS » Scopus
[19] Chang D.T., Jones J.A., Meyerson H.,
Colton E., Kwon I.K., Matsuda T.,
Anderson J.M.(2008) J Biomed Mater
Res A., 87(3):676-87.
» CrossRef » Google Scholar » PubMed » DOAJ » CAS » Scopus
[20] Li M., Mondrinos M.J., Chen X., Gandhi
M.R., Ko F.K., Lelkes P.I. (2006) J
Biomed Mater Res A.,79(4):963-73.
» CrossRef » Google Scholar » PubMed » DOAJ » CAS » Scopus
[21] Rice, William L., Firdous S., Gupta S.,
Hunter M., Foo Cheryl W. P.,Wang Y.,
Kim H. J. (2008) Biomaterials,29 (13),
2015-2024.
» CrossRef » Google Scholar » PubMed » DOAJ » CAS » Scopus
[22] Jaeger K.E., Eggert T. (2004) Curr Opin
Biotechnol. 15 (4): 305–13
» CrossRef » Google Scholar » PubMed » DOAJ » CAS » Scopus
[23] Bjerketorp J., Rosander A., Nilsson M.,
Jacobsson K., Frykberg L.(2004) J Med
Microbiol., 53(Pt 10):945-51
» CrossRef » Google Scholar » PubMed » DOAJ » CAS » Scopus
[24] Ibrahim C. O. (2008) Bioresource
technology, 99 (11), 4572-4582
» CrossRef » Google Scholar » PubMed » DOAJ » CAS » Scopus
[25] Wingkono Gracy A.(2004), Georgia Institute
of Technology
» CrossRef » Google Scholar » PubMed » DOAJ » CAS » Scopus
[26] Vepari C., Kaplan D.L.(2007) Progress in
Polymer Science, 32 (8), p.991-1007
» CrossRef » Google Scholar » PubMed » DOAJ » CAS » Scopus
[27] Kirk O., Borchert T.V., Fuglsang C.C.
(2002) Curr Opin Biotechnol. ;13(4):345-
51.
» CrossRef » Google Scholar » PubMed » DOAJ » CAS » Scopus
[28] Damsten M.C., van Vugt-Lussenburg B.M.,
Zeldenthuis T., Vlieger J.S.,
Commandeur J.N., Vermeulen N.P.
(2008) Chem Biol Interact, 96-107
» CrossRef » Google Scholar » PubMed » DOAJ » CAS » Scopus
[29] Chaput J.C., Woodbury N.W., Stearns L.A,
Williams B.A. (2008) Expert Opin Biol
Therapy, 1087-98
» CrossRef » Google Scholar » PubMed » DOAJ » CAS » Scopus
[30] Antranikian G., Vorgias C.E., Bertoldo C.
(2005) Adv Biochem Eng Biotechnol,
219-62
» CrossRef » Google Scholar » PubMed » DOAJ » CAS » Scopus
[31] Wang X., Kim H.J., Wong C., Vepari C.,
Matsumoto A., Kaplan D. L. (2006)
Materials Today, 9 (12), 44-53.
» CrossRef » Google Scholar » PubMed » DOAJ » CAS » Scopus
[32] Daamen Willeke F., Nillesen Suzan T. M.,
Wismans Ronnie G., Reinhardt Dieter
P., Hafmans Theo., Veerkamp Jacques
H., van Kuppevelt Toin H. (2008) Tissue
engineering, 14(3):349-60
» CrossRef » Google Scholar » PubMed » DOAJ » CAS » Scopus
[33] Taylor I.N., Brown R.C., Bycroft M., King G.,
Littlechild J.A., Lloyd M.C., Praquin C.,
Toogood H.S., Taylor S.J. (2004)
Biochemical Society transactions, 32 (Pt
2), 290-292
» CrossRef » Google Scholar » PubMed » DOAJ » CAS » Scopus
[34] Meynial S., Cervin I., Soucaille M. P.
(2005) Applied and Environmental
Microbiology, 2140–2144
» CrossRef » Google Scholar » PubMed » DOAJ » CAS » Scopus
[35] Do-Young Yum, Bong-Yong Lee, Dae-
Hyum Hahm, and Jae-Gu Pan (1998) J
Bacteriol., 180(22): 5984–5988.
» CrossRef » Google Scholar » PubMed » DOAJ » CAS » Scopus
[36] Jones A., Lamsa M., Frandsen T.P.,
Spendler T., Harris P., Sloma A., Xu F.,
Nielsen J.B., Cherry, J.R. (2008)
Journal of Biotechnology, 134 (3-4),
325-333
» CrossRef » Google Scholar » PubMed » DOAJ » CAS » Scopus
[37] Marrs B., Delagrave S., Murphy D. (1999)
Current Opinion in Microbiology, 241-
245
» CrossRef » Google Scholar » PubMed » DOAJ » CAS » Scopus
[38] Mijts B. N. and Dannert C. S. (2003)
Current Opinion in Biotechnology, 597-
602
» CrossRef » Google Scholar » PubMed » DOAJ » CAS » Scopus
[39] Gunnarsson N., Eliasson A., Nielsen
J.(2004) Adv Biochem Eng Biotechnol.,
88:137-78.
» CrossRef » Google Scholar » PubMed » DOAJ » CAS » Scopus
[40] Nielsen J. (1998) Current opinion in
microbiology, 330-336
» CrossRef » Google Scholar » PubMed » DOAJ » CAS » Scopus
[41] Hiroaki K. (2002) Science , 295 (5560),
1662 - 1664
» CrossRef » Google Scholar » PubMed » DOAJ » CAS » Scopus
[42] Mathews J., Wang G. (2009) International
Journal of Hydrogen Energy, 7404-
7416.
» CrossRef » Google Scholar » PubMed » DOAJ » CAS » Scopus
[43] Maskarinec S.A., Tirrell D. A. (2005)
Current Opinion in Biotechnology,
16:422–426
» CrossRef » Google Scholar » PubMed » DOAJ » CAS » Scopus
[44] Warshel A., Sharma P.K., Kato M., Xiang
Y., Liu H., Olsson M.H. (2006) Chem.
Rev. 106 (8): 3210–35
» CrossRef » Google Scholar » PubMed » DOAJ » CAS » Scopus
[45] Olsson M.H., Parson W.W., Warshel A.
(2006) Chem. Rev. 106 (5): 1737–56
» CrossRef » Google Scholar » PubMed » DOAJ » CAS » Scopus