Phylogenetic signatures of functional conservedness in lantibiotics- an in-silico regulomics study

Sayak Ganguli1*, Protip Basu2, Hirak Jyoti Chakraborty3, Paushali Roy4, Abhijit Datta5
1DBT-Centre for Bioinformatics, Presidency College, Kolkata
2DBT-Centre for Bioinformatics, Presidency College, Kolkata
3DBT-Centre for Bioinformatics, Presidency College, Kolkata
4DBT-Centre for Bioinformatics, Presidency College, Kolkata
5DBT-Centre for Bioinformatics, Presidency College, Kolkata
* Corresponding Author : sayakbif@yahoo.com

Received : -     Accepted : -     Published : 21-12-2010
Volume : 2     Issue : 2       Pages : 5 - 11
Int J Microbiol Res 2.2 (2010):5-11
DOI : http://dx.doi.org/10.9735/0975-5276.2.2.5-11

Conflict of Interest : None declared

Cite - MLA : Sayak Ganguli, et al "Phylogenetic signatures of functional conservedness in lantibiotics- an in-silico regulomics study." International Journal of Microbiology Research 2.2 (2010):5-11. http://dx.doi.org/10.9735/0975-5276.2.2.5-11

Cite - APA : Sayak Ganguli, Protip Basu, Hirak Jyoti Chakraborty, Paushali Roy, Abhijit Datta (2010). Phylogenetic signatures of functional conservedness in lantibiotics- an in-silico regulomics study. International Journal of Microbiology Research, 2 (2), 5-11. http://dx.doi.org/10.9735/0975-5276.2.2.5-11

Cite - Chicago : Sayak Ganguli, Protip Basu, Hirak Jyoti Chakraborty, Paushali Roy, and Abhijit Datta "Phylogenetic signatures of functional conservedness in lantibiotics- an in-silico regulomics study." International Journal of Microbiology Research 2, no. 2 (2010):5-11. http://dx.doi.org/10.9735/0975-5276.2.2.5-11

Copyright : © 2010, Sayak Ganguli, et al, Published by Bioinfo Publications. This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution and reproduction in any medium, provided the original author and source are credited.

Abstract

The name Lantibiotics was introduced in 1988 as an abbreviation for "Lanthionine-containing peptide antibiotics". In spite of this naming, Lantibiotics are not classed as antibiotics. The first structures of these antimicrobial agents were produced by pioneering work by Gross and Morell in the late sixties and early seventies, thus marking the formal introduction of Lantibiotics. Since then Lantibiotics such as Nisin have been for food preservation and have yet to encounter significant bacterial resistance. These attributes of lantibiotics have led to more detailed research into them.

References

[1] Hynes W.L., Friend V.L., Ferretti J.J., (1994) Appl. Environ.Microbiol, 60: 4207-4209  
» CrossRef   » Google Scholar   » PubMed   » DOAJ   » CAS   » Scopus  

[2] Brotz H., Sahl H.G., (2000), Journal of Antimicrobial Chemotherapy, 46: 1-6.  
» CrossRef   » Google Scholar   » PubMed   » DOAJ   » CAS   » Scopus  

[3] Van Kraaij C., de Vos W.M., Siezen R.J. and Kuipers O.P. (1999) Nat. Prod. Rep, 16: 575–587  
» CrossRef   » Google Scholar   » PubMed   » DOAJ   » CAS   » Scopus  

[4] Cotter P.D., Hill C., Ross R.P. (2005) Current Protein and Peptide Science, 6: 61-75.  
» CrossRef   » Google Scholar   » PubMed   » DOAJ   » CAS   » Scopus  

[5] Netz D.J.A., Sahl H.G., Marcolino R., Nascimento J.D., de Oliveira S.S., Soares M.B. and Bastos M.D.D. (2001) Journal of Molecular Biology, 311: 939- 949  
» CrossRef   » Google Scholar   » PubMed   » DOAJ   » CAS   » Scopus  

[6] Nes I.F., Tagg J.R. (1996) International Journal of General and Molecular Microbiology, 69: 89-97  
» CrossRef   » Google Scholar   » PubMed   » DOAJ   » CAS   » Scopus  

[7] Martin N.I., Breukink E. (2007) Future Microbiol., 2(5): 513-525.  
» CrossRef   » Google Scholar   » PubMed   » DOAJ   » CAS   » Scopus  

[8] Hyink O., Wescombe P.A., Upton M., Ragland N., Burton J.P. and Tagg J.R. (2007) Appl. Environ. Microbiol. 73(4): 1107–1113  
» CrossRef   » Google Scholar   » PubMed   » DOAJ   » CAS   » Scopus  

[9] Sahl H.G., Bierbaum G. (1998), Annual Review of Microbiology, 52: 41-79  
» CrossRef   » Google Scholar   » PubMed   » DOAJ   » CAS   » Scopus  

[10] Sahl H.G., Bierbaum G. (2008) Microbe, 3(10):467-473.  
» CrossRef   » Google Scholar   » PubMed   » DOAJ   » CAS   » Scopus  

[11] Savadogo A., Ouattara C.A.T., Bassole I.H., Traore S.A. (2006) African Journal of Biotechnology, 5(9): 678-683  
» CrossRef   » Google Scholar   » PubMed   » DOAJ   » CAS   » Scopus  

[12] Dimov S., Ivanova P., Harizanova N. (2005) Biotechnol. & Biotechnol. Eq.General & Applied Genetics, 19(3): 4-10  
» CrossRef   » Google Scholar   » PubMed   » DOAJ   » CAS   » Scopus  

[13] Hasper H.E., Kramer N.E., Smith J.L., Hillman J.D., Zachariah C., Kuipers O.P., de Kruijff B., Breukink E. (2006) Science, 313: 1636-1637.  
» CrossRef   » Google Scholar   » PubMed   » DOAJ   » CAS   » Scopus  

[14] Boakes S., Wadman S. (2008) IPT, 27: 22-24.  
» CrossRef   » Google Scholar   » PubMed   » DOAJ   » CAS   » Scopus  

[15] Oscariz J.C., Pisabarro A.G. (2001) Int.Microbiology, 4: 13-19  
» CrossRef   » Google Scholar   » PubMed   » DOAJ   » CAS   » Scopus  

[16] Sali A., Blundell T.L., (1993) J.Mol.Biol. 234(3):779-815.  
» CrossRef   » Google Scholar   » PubMed   » DOAJ   » CAS   » Scopus